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Articles by Ananth Hari
Genotyping of selected germline adaptive immune system loci using short-read sequencing data
1 1National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA; 2Department of Electrical Engineering, University of Maryland, College Park, Maryland 20742, USA; 3Department of Computer Science, University of Victoria, British Columbia V8P 5C2, Canada Corresponding authors: mike.ford{at}nih.gov, cenk.sahinalp{at}nih.gov Footnotes [Supplemental material is available for this article.] Article published online before print.
Biologically-informed Killer cell immunoglobulin-like receptor (KIR) gene annotation tool
Abstract Natural killer (NK) cells are essential components of the innate immune system, with their activity significantly regulated by Killer cell Immunoglobulin-like Receptors (KIRs). The diversity and structural complexity of KIR genes present significant challenges for accurate genotyping, essential for understanding NK cell functions and their implications in health and disease.
Geny: A Genotyping Tool for Allelic Decomposition of Killer Cell Immunoglobulin-Like Receptor Genes
Abstract Accurate genotyping of Killer cell Immunoglobulin-like Receptor (KIR) genes plays a pivotal role in enhancing our understanding of innate immune responses, disease correlations, and the advancement of personalized medicine.
Aldy 4: An efficient genotyper and star-allele caller for pharmacogenomics
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ImmunoTyper-SR: A Novel Computational Approach for Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data
ImmunoTyper-SR: A Novel Computational Approach for Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data Michael Ford, Ananth Hari, Oscar Rodriguez, Junyan Xu, Justin Lack, Cihan Oguz, Yu Zhang, Sarah Weber, Mary Magliocco, Jason Barnett, Sandhya Xirasagar, Smilee Samuel, Luisa Imberti, Paolo Bonfanti, Andrea Biondi, Clifton Dalgard, Stephen Chanock, Lindsey Rosen, Steven Holland, Helen Su, Luigi Notarangelo, Uzi Vishkin, Corey Watson, Cenk Sahinalp bioRxiv...
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