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Abstract We report high-quality, haplotype-resolved diploid genome assemblies for two phenotypically divergent Lepista sordida strains, Hua8 and L-2. Using the Illumina NovaSeq 6000 and PacBio HiFi sequencing, we assembled two haplotypes per strain. Hua8 haplotypes measure ~49.06 Mb and ~44.33 Mb (total ~93.39 Mb), and L-2 haplotypes measure ~57.03 Mb and ~47.93 Mb (total ~104.97 Mb). Each assembly consists of 24 scaffolds with high continuity, exhibiting multi-megabase N50 values.
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