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Articles by Penny Cuda

HuBMAP Data Portal: a resource for multimodal spatial and single-cell data of healthy human tissues

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By Morgan Turner, Thomas Smits, Brendan Honick, Bill Shirey, Lisa Choy, Shaokun An, David Betancur, Karl Burke, Ivan Cao-Berg, John Conroy, Sean Donahue, Stephen Fisher, Ed Hanna Verified, Josef Hardi, Mark Keller, Devin Lange, Xiang Li, Yan Ma, Richard Morgan, Mark A. Musen, Martin O’Connor, Alexander J. Ropelewski, J. Alan Simmons, Xu Tang, Zhou Yuan, Martin Hemberg, HuBmap Consortium, Matthew Ruffalo, Jonathan Silverstein, Philip Blood, Nils Gehlenborg, Tiffany S. Liaw, Nikolay Akhmetov, Dominic Bordelon, Chris Csonka, Penny Cuda, Derek Furst, Tabassum Kakar, Alison McWilliams, Austen Money, Eric Mörth, Juan Muerto, Emily Nic, Gesina A. Phillips, Ryan Sablosky, Sravani Saripalli, Max Sibilla, Derek Simmel, Joel Welling
| Nature Verified
Abstract The NIH Human BioMolecular Atlas Program (HuBMAP) Data Portal (https://portal.hubmapconsortium.org/) serves as a comprehensive repository for multimodal, multi-scale spatial and single-cell data from healthy human tissues. As of August 2026, the portal hosts 9,316 public datasets from 26 data types spanning 29 organ classes across 501 donors. Portal infrastructure and user interfaces support data search and discovery, visualization, and analysis directly in web browsers.
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