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Articles by van Bakel
Computer Science > Logic in Computer Science
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Mycobacterium tuberculosis Mce3R TetR-like Repressor Forms an Asymmetric Four-Helix Bundle and Binds a Nonpalindrome Sequence†
M. tuberculosis (Mtb), the causative agent of tuberculosis (TB), is the second deadliest infectious disease after the COVID-19 virus. (1) Throughout its coevolution with the human host, Mtb has developed the ability to survive and adapt to the changing environment within the host. (2−4) However, the precise mechanisms through which Mtb controls its gene expression for survival and persistence remain unclear.
[2411.02168] Do graph neural network states contain graph properties?
arXiv:2411.02168 (cs) View PDF HTML (experimental) Comments: Subjects: Machine Learning (cs.LG); Artificial Intelligence (cs.AI) Cite as: arXiv:2411.02168 [cs.LG] (or arXiv:2411.02168v1 [cs.LG] for this version) https://doi.org/10.48550/arXiv.2411.02168 Submission history From: Tom Pelletreau-Duris [ view email] [v1] Mon, 4 Nov 2024 15:26:07 UTC (4,378 KB) Bibliographic Tools Bibliographic Explorer Toggle Bibliographic Explorer () Connected Papers Toggle Connected Papers (What is Connected...
A cardiac-rehab behaviour intervention to reduce sedentary time in coronary artery disease patients: the SIT LESS randomized controlled trial - International Journal of Behavioral Nutrition and Physical Activity
A parallel-group randomized controlled trial was conducted in order to determine the effectiveness of SIT LESS: a 12-week, hybrid and personalized behaviour change intervention in addition to CR, with a primary focus on reducing and interrupting ST in CAD patients (Netherlands Trial Register: NL9263). The rationale and design of the SIT LESS trial has previously been described in detail including the sample size calculation [18].
Mapping SARS-CoV-2 antigenic relationships and serological responses
Funding provided by: National Institutes of Health Crossref Funder Registry ID: https://ror.org/01cwqze88 Award Number: HHSN272201400008C Funding provided by: National Institute of Allergy and Infectious Diseases Crossref Funder Registry ID: https://ror.org/043z4tv69 Award Number: 75N93019C00050 Funding provided by: National Institute of Allergy and Infectious Diseases Crossref Funder Registry ID: https://ror.org/043z4tv69 Award Number: 75N93021C00014 Funding provided by: Centers for Disease...
Clinical, microbiological and genomic characterization of Gram-negative bacteria with dual carbapenemases as identified by rapid molecular testing
Carbapenem resistance in Gram-negative bacteria occurs due to several mechanisms, which include carbapenemase production, diminished outer membrane permeability, and overexpression of efflux pump, among others.1 Production of carbapenemases, however, is the most significant mechanism of resistance since carbapenemases are typically encoded by genes in mobile genetic elements that can be horizontally transferred within species and genera.2 Infections with carbapenem-resistant Enterobacterales...
[2109.10447] Adding Negation to Lambda Mu
[Submitted on 21 Sep 2021 ( v1 ), last revised 24 May 2023 (this version, v5)] Title:Adding Negation to Lambda Mu Download a PDF of the paper titled Adding Negation to Lambda Mu, by Steffen van Bakel Download PDF Abstract: We present $\cal L$, an extension of Parigot's $\lambda\mu$-calculus by adding negation as a type constructor, together with syntactic constructs that represent negation introduction and elimination.
Effectiveness of an intervention to reduce sedentary behaviour as a personalised secondary prevention strategy for patients with coronary artery disease: main outcomes of the SIT LESS randomised clinical trial | International Journal of Behavioral Nutriti
Our randomised clinical trial in 212 patients with CAD participating in CR showed that SIT LESS did not induce significantly greater reductions in ST compared to controls, but delivery was feasible and a reduced odds of ST ≥ 9.5 h/day was observed. We also observed improvements of physical activity levels and reductions in the number of prolonged sedentary bouts and cardiovascular risk score from pre- to post-CR, but the change was comparable between groups.
ETpathfinder: a cryogenic testbed for interferometric gravitational-wave detectors
Utina, A. et al. (2022) ETpathfinder: a cryogenic testbed for interferometric gravitational-wave detectors. Classical and Quantum Gravity, 39(21), 215008. (doi: 10.1088/1361-6382/ac8fdb) Text 364817.pdf - Published Version Available under License Creative Commons Attribution.
Parents of young infants report poor mental health and more insensitive parenting during the first Covid-19 lockdown - BMC Pregnancy and Childbirth
Participants This study is part of an ongoing international research alliance investigating perinatal experiences of (expecting) parents during the Covid-19 outbreak and their children: the CovGen Research Alliance (www.covgen.org). More information about the study background and used questionnaires can be found at our OSF page (https://osf.io/uqhcv/).
Impact of presentation at conference with timed release of academic publication - Internal and Emergency Medicine
The number of RCTs with a coordinated conference presentation that were published in NEJM, JAMA, and Lancet increased over time. Coordinated publications were particularly common among RCTs in the field of cardiovascular disease. Trials with coordinated publication were more likely to be unblinded and more likely to be funded by industry than trials with non-coordinated publication.
Impact of presentation at conference with timed release of academic publication
Internal and Emergency Medicine, Apr 2023 This is a preview of a remote PDF: https://link.springer.com/content/pdf/10.1007/s11739-023-03258-z.pdf Hughes, Emily, Raudanskis, Ashley, Raissi, Afsaneh, Purohit, Ushma, Boctor, Monica, Manzoor, Saba, Hodzic-Santor, Benazir, Van Bakel, Tamara, Zhu, Kevin, Fralick, Michael. , Internal and Emergency Medicine, 2023, pp. 1-9, DOI: 10.1007/s11739-023-03258-z
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