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Carlus Deneke

As seen in: Nature, MDPI, Microbiology Research
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Articles

Compatibility of whole-genome sequencing data from Illumina and Ion Torrent technologies in genome comparison analysis of Listeria monocytogenes

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By Stefanie Lüth, Jannika Fuchs, Carlus Deneke
| Microbiology Research
Article metrics loading... /content/journal/mgen/10.1099/mgen.0.001389 Download as PowerPoint /deliver/fulltext/mgen/11/5/mgen001389.html?itemId=/content/journal/mgen/10.1099/mgen.0.001389&mimeType=html&fmt=ahah References World Health Organization Whole genome sequencing for foodborne disease surveillance: landscape paper; 2018 Allard MW, Stevens EL, Brown EW. All for one and one for all: the true potential of whole-genome sequencing.
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Exploring Long-Read Metagenomics for Full Characterization of Shiga Toxin-Producing Escherichia coli in Presence of Commensal E. coli

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By Carlus Deneke, Sandra Jaudou, Mai-Lan Tran, Carina Salzinger
| MDPI
Altmetric share Share announcement Help format_quote Cite thumb_up ... Endorse textsms ... Comment Need Help? Support Find support for a specific problem in the support section of our website. Get Support Feedback Please let us know what you think of our products and services. Give Feedback Information Visit our dedicated information section to learn more about MDPI.
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′GC content-associated sequencing bias caused by library preparation method may affect Salmonella serotype prediction using SeqSero2′

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By Laura Uelze, Maria Borowiak, Carlus Deneke, István Szabó
| American Society for Microbiology (ASM)
Author Reply Laura Uelze, Maria Borowiak, Carlus Deneke, István Szabó, Jennie Fischer, Simon H. Tausch, Burkhard Malorny DOI: 10.1128/AEM.01260-20 ABSTRACT We appreciate the additional data analysis and comments on our paper, confirming our finding that the GC bias in whole genome sequence data will impact Salmonella in silico serotyping prediction with antigen-mapping-based tools.… Copyright © 2020 American Society for Microbiology.
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