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(A) For each RBP that showed considerable binding to LINE repeats in iCLIP (see B), we selected the 50 LINE repeats with strongest coverage (cDNAs per 100nt). For comparison we included TARDBP, which showed little binding to LINE repeats. All iCLIP data selected was collected from HEK293 cells. The heatmap shows comparison of binding strength at this set of 214 LINE repeats, and the nearest neighbor analysis for each RBP.
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