Dahiana Arcila

DATA AVAILABILITY STATEMENT The data that support the findings of this study are available from the corresponding author upon reasonable request. REFERENCES , , , , , & (2020). MitoFinder: Efficient automated large-scale extraction of mitogenomic data in target enrichment phylogenomics. Molecular Ecology Resources, 20, 892–905. https://doi.org/10.1111/1755-0998.13160 , & (1987). A revision of the genus Monognathus (Pisces: Monognathidae), with descriptions of two new species.

Abstract Habitat transitions have shaped the evolutionary trajectory of many clades. Sea catfishes (Ariidae) have repeatedly undergone ecological transitions, including colonizing freshwaters from marine environments, leading to an adaptive radiation in Australia and New Guinea alongside non-radiating freshwater lineages elsewhere. Here, we generate and analyze one long-read reference genome and 66 short-read whole genome assemblies, in conjunction with genomic data for 54 additional species.

Abstract Phylogenetic inference can be influenced by both underlying biological processes and methodological factors. While biological processes can be modeled, these models frequently make the assumption that methodological factors do not significantly influence the outcome of phylogenomic analyses. Depending on their severity, methodological factors can introduce inconsistency and uncertainty into the inference process.