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Buffering Updates Enables Efficient Dynamic de Bruijn Graphs

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By Christina Boucher, Jarno Alanko, Bahar Alipanahi, Jonathen Settle
| biorxiv.org
New Results Jarno Alanko, Bahar Alipanahi, Jonathen Settle, Christina Boucher, Travis Gagie doi: https://doi.org/10.1101/2021.03.16.435535 Abstract Motivation: The de Bruijn graph has become a ubiquitous graph model for biological data ever since its initial introduction in the late 1990s. It has been used for a variety of purposes including genome assembly, variant detection, and storage of assembled genomes.
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