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cellstruct: Metrics scores to quantify the biological preservation between two embeddings

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By John F. Ouyang, Jui Wan Loh, Duke NUS Singapore
| biorxiv.org
Abstract Single-cell transcriptomics (scRNA-seq) is extensively applied in uncovering biological heterogeneity. There are different dimensionality reduction techniques, but it is unclear which method works best in preserving biological information when creating a two-dimensional embedding.
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