Junhao Zhu
As seen in:
Nature,
Wiley Online Library,
arXiv,
PLOS,
MDPI,
Genome Biology,
Science Magazine,
Royal Society of Chemistry,
BioRxiv,
Cell Reports
and
Is this you? As a journalist, you can create a free Muck Rack account to customize your profile, list your contact preferences, and upload a portfolio of your best work.
Claim your profile
Articles by Junhao Zhu
[2602.22721] Replacing Multi-Step Assembly of Data Preparation Pipelines with One-Step LLM Pipeline Generation for Table QA
arXivLabs is a framework that allows collaborators to develop and share new arXiv features directly on our website. Both individuals and organizations that work with arXivLabs have embraced and accepted our values of openness, community, excellence, and user data privacy. arXiv is committed to these values and only works with partners that adhere to them. Have an idea for a project that will add value for arXiv's community? Learn more about arXivLabs.
De-aberration for noninvasive transcranial photoacoustic computed tomography through an adult human skull - Communications Physics
Abstract Noninvasive transcranial photoacoustic computed tomography (PACT) of the human brain, despite its clinical potential as a complementary technology to functional MRI, remains impeded by the acoustic distortion induced by the human skull. The distortion, which is attributed to the markedly different material properties of the skull relative to soft tissue, results in heavily aberrated PACT images.
Bifunctional Photonic Synapse With Short‐Term and Long‐Term Plasticity for Neuromorphic Image Recognition
Opens in a new window Opens an external website Opens an external website in a new window To improve your experience, we (and our partners) store and/or access information on your terminal (cookie or equivalent) with your consent for all our websites and applications, on your connected terminals.
p‐Type Transparent Conducting Material Realized by Composite Thin Film of Chalcogenide Perovskite LaScS3 and Graphene
Conflicts of Interest The authors declare no conflict of interest. Data Availability Statement The data that support the findings of this study are available from the corresponding author upon reasonable request. Supporting Information Filename Description adfm73683-sup-0001-SuppMat.docx5.3 MB Supporting file: adfm73683-sup-0001-SuppMat.docx.
HydraRNA: a hybrid architecture based full-length RNA language model - Genome Biology
We proposed a novel and hybrid architecture for RNA masked language modeling. The model is pre-trained in a self-supervised learning manner via masked token reconstruction. Then it is partially or fully fine-tuned for a variety of downstream prediction tasks. The basic building blocks of HydraRNA include two types: Hydra and MHA. HydraRNA employs a 12-layer architecture and a hidden state dimension of 1024. Each layer contains a Hydra module except the 6th and 12th layer, which contains a MHA module.
Hot‐Pressing Annealing‐Induced Light Utilization Enhancement and Crystallinity Optimization Enable High‐Performance Narrowband Ultraviolet Photodetectors for Real‐Time Ultraviolet Radiation Monitors
1 Introduction According to statistics from the World Health Organization, solar UV radiation is responsible for over 1.5 million cases of skin cancer annually. Additionally, up to 10% of cataracts may result from excessive UV exposure.
Metabolites with Anti-Inflammatory Activities Isolated from the Mangrove Endophytic Fungus Dothiorella sp. ZJQQYZ-1
All articles published by MDPI are made immediately available worldwide under an open access license. No special permission is required to reuse all or part of the article published by MDPI, including figures and tables. For articles published under an open access Creative Common CC BY license, any part of the article may be reused without permission provided that the original article is clearly cited. For more information, please refer to https://www.mdpi.com/openaccess.
Integration of Photo‐ and Thermal‐Detection Based on Hexagonal Chalcogenide Perovskite Sr8Ti7S21 with Full Spectrum Absorption
Conflict of Interest The authors declare no conflict of interest. Supporting Information Filename Description adfm202500792-sup-0001-SuppMat.docx3.1 MB Supporting Information adfm202500792-sup-0002-VideoS1.mp42.9 MB Supplemental Video 1 References 1, , , Appl. Phys. Rev. 2024, 11, 021338. 2, , , , Adv. Opt. Mater. 2021, 10, 2101704. 3a) , , , , , , , , , , , , , , , , , Nano Energy 2020, 68, 104317; b) , , , , , , , , , Adv. Funct. Mater. 2023, 33, 2304575. 4a) , , , , , , Adv. Funct. Mater.
HydraRNA: a hybrid architecture based full-length RNA language model
Abstract RNA, an essential component of the central dogma of molecular biology, plays versatile roles in all cellular processes. RNA large language models (LLMs) are emerging as powerful methods in RNA research to decipher its intricate network of function and regulation. However, previous RNA LLMs were based on the transformer model and pre-trained on short segment of non-coding RNAs, which limits their general usability.
High Energy Physics - Phenomenology
[Submitted on 11 Feb 2025 ( v1 ), last revised 19 Sep 2026 (this version, v3)] Title:Neutralino dark matter in gauge mediation View a PDF of the paper titled Neutralino dark matter in gauge mediation, by Michihisa Takeuchi and Norimi Yokozaki and Junhao Zhu View PDF HTML (experimental) Abstract:We explore the potential of neutralino dark matter within the framework of gauge-mediated supersymmetry (SUSY) breaking.
Theoretical Investigation of Arsenene/g-C6N6 Van Der Waals Heterojunction: Direct Z-Scheme with High Photocatalytic Efficiency
Theoretical Investigation of Arsenene/g-C6N6 Van Der Waals Heterojunction: Direct Z-Scheme with High Photocatalytic Efficiency With advancements in algorithms and computational power, theoretical calculations have become increasingly feasible for designing and constructing functional materials.
Paired analysis of host and pathogen genomes identifies determinants of human tuberculosis - Nature Communications
Abstract Infectious disease is the result of interactions between host and pathogen and can depend on genetic variations in both. We conduct a genome-to-genome study of paired human and Mycobacterium tuberculosis genomes from a cohort of 1556 tuberculosis patients in Lima, Peru. We identify an association between a human intronic variant (rs3130660, OR = 10.06, 95%CI: 4.87 − 20.77, P = 7.92 × 10−8) in the FLOT1 gene and a subclavaluee of Mtb Lineage 2.
Three-dimensional solidification modeling of various materials using the lattice Boltzmann method with an explicit enthalpy equation
Based on the mesoscopic scale, the lattice Boltzmann method (LBM) with an enthalpy-based model represented in the form of distribution functions is widely used in the liquid-solid phase transition process of energy storage materials due to its direct and relatively accurate characterization of the presence of latent heat of solidification.
Study on the Impact of Tree Species on the Wind Environment in Tree Arrays Based on Fluid-Structure Interaction: A Case Study of Hangzhou Urban Area
1. Introduction In recent years, the acceleration of urbanization has led to increasingly prominent issues such as the urban heat island effect, air pollution, and deterioration of living environments [1]. Trees, as a vital part of urban ecosystems, not only improve the urban breeze environment by absorbing carbon dioxide and reducing temperature but also help alleviate the urban heat island effect, optimize wind flow, and thus provide a more pleasant outdoor environment for citizens [2].
Modeling single cell trajectory using forward-backward stochastic differential equations
Loading metrics Open Access Peer-reviewed Research Article Citation: Zhang K, Zhu J, Kong D, Zhang Z (2024) Modeling single cell trajectory using forward-backward stochastic differential equations. PLoS Comput Biol 20(4): e1012015. https://doi.org/10.1371/journal.pcbi.1012015 Editor: Jianhua Xing, University of Pittsburgh School of Medicine, UNITED STATES Received: October 25, 2023; Accepted: March 22, 2024; Published: April 15, 2024 Copyright: © 2024 Zhang et al.
Genetically encoded transcriptional plasticity underlies stress adaptation in Mycobacterium tuberculosis - Nature Communications
Abstract Transcriptional regulation is a critical adaptive mechanism that allows bacteria to respond to changing environments, yet the concept of transcriptional plasticity (TP) – the variability of gene expression in response to environmental changes – remains largely unexplored. In this study, we investigate the genome-wide TP profiles of Mycobacterium tuberculosis (Mtb) genes by analyzing 894 RNA sequencing samples derived from 73 different environmental conditions.
Cytosporones with Anti-Inflammatory Activities from the Mangrove Endophytic Fungus Phomopsis sp. QYM-13
All articles published by MDPI are made immediately available worldwide under an open access license. No special permission is required to reuse all or part of the article published by MDPI, including figures and tables. For articles published under an open access Creative Common CC BY license, any part of the article may be reused without permission provided that the original article is clearly cited. For more information, please refer to https://www.mdpi.com/openaccess.
Genetically encoded transcriptional plasticity underlies stress adaptation in Mycobacterium tuberculosis
Abstract Transcriptional regulation is a critical adaptive mechanism that allows bacteria to respond to changing environments, yet the concept of transcriptional plasticity (TP) remains largely unexplored. In this study, we investigate the genome-wide TP profiles of Mycobacterium tuberculosis (Mtb) genes by analyzing 894 RNA sequencing samples derived from 73 different environmental conditions.
Modeling Single Cell Trajectory Using Forward-Backward Stochastic Differential Equations
Abstract Recent advances in single-cell sequencing technology have provided opportunities for mathematical modeling of dynamic developmental processes at the single-cell level, such as inferring developmental trajectories. Optimal transport has emerged as a promising theoretical framework for this task by computing pairings between cells from different time points.
In Vitro Activity of Echinocandins Against T. rubrum
Back to Journals » Infection and Drug Resistance » Volume 16 Authors Su H , Jiang W, Verweij PE, Li L, Zhu J, Han J, Zhu M, Deng S Received 29 June 2023 Accepted for publication 12 August 2023 Published 18 August 2023 Volume 2023:16 Pages 5395—5403 DOI https://doi.org/10.2147/IDR.S423735 Checked for plagiarism Yes Review by Single anonymous peer review Peer reviewer comments 3 Editor who approved publication: Prof.
The Influence of Wind-Induced Response in Urban Trees on the Surrounding Flow Field
Abstract : In recent years, cities have experienced frequent climate changes and deteriorating wind environments. Urban vegetation has become an important measure to improve local microclimates with its flexible configuration. Leaves and branches also reorient with the direction of wind, affecting the airflow through the tree. However, trees are usually considered as stationary porous media areas and are not influenced by wind speed in existing numerical simulation studies.
Mycobacterial nucleoid-associated protein Lsr2 is required for productive mycobacteriophage infection - Nature Microbiology
Abstract Mycobacteriophages are a diverse group of viruses infecting Mycobacterium with substantial therapeutic potential. However, as this potential becomes realized, the molecular details of phage infection and mechanisms of resistance remain ill-defined. Here we use live-cell fluorescence microscopy to visualize the spatiotemporal dynamics of mycobacteriophage infection in single cells and populations, showing that infection is dependent on the host nucleoid-associated Lsr2 protein.
Chemically-induced targeted protein degradation in mycobacteria uncovers antibacterial effects and potentiates antibiotic efficacy
Thank you for your interest in spreading the word about bioRxiv. NOTE: Your email address is requested solely to identify you as the sender of this article. Your Email * Your Name * Send To * Enter multiple addresses on separate lines or separate them with commas. Message Subject (Your Name) has forwarded a page to you from bioRxiv Message Body (Your Name) thought you would like to see this page from the bioRxiv website.
Spatiotemporal localization of proteins in mycobacteria
Highlights • MOMIA and GEMATRIA efficiently model mycobacterial protein localization • Polar exclusion of mycobacterial ribosomes relies on active translation • GEMATRIA reveals spatial partitioning of mycobacterial membrane proteins Summary Although prokaryotic organisms lack traditional organelles, they must still organize cellular structures in space and time, challenges that different species solve differently.
Differences in in vitro interactions between macrophages with pathogenic and environmental strains of Prototheca
Future MicrobiologyAhead of Print Research Article , , Timothy Kudinha Charles Sturt University, Leeds Parade, Orange, New South Wales, Australia Centre for Infectious Diseases & Microbiology Laboratory Services, ICPMR-Pathology West, Westmead Hospital, The University of Sydney, Darcy Road, Westmead, New South Wales, Australia , & Qiang-qiang Zhang *Author for correspondence: E-mail Address: zhangqq8@163.com Department of Dermatology, Huashan Hospital, Fudan University, Shanghai 200040, China...
Significantly improved thermal stability and thermoelectric performance of Cu-deficient Cu4-δGa4Te8 (δ=1.12) chalcogenide through an addition of Sb
Our previous work demonstrated that the ternary Cu18Ga25Te50 compound is a good thermoelectric candidate. However, its thermal stability is unsatisfactory, which suppresses the improvement of thermoelectric performance at high temperatures. In this work, we have tuned the chemical compositions through the addition of Sb to Cu-deficient Cu4-δGa4Te8 (δ=1.12) compound.
Significant improvement in thermoelectric performance of Sb-incorporated chalcopyrite compounds Cu18Ga25SbxTe50-x (x=0-3.125) through the coordination of energy band and crystal structures - Journal of Materials Chemistry A (RSC Publishing)
Newly developed chalcopyrite semiconductor Cu18Ga25Te50 (Cu/Ga=0.72) has an inherent deficiency in Cu. Therefore, it is taken as a thermoelectric candidate due to a high vacancy rate of copper. In this work, we have observed that after Sb substitution for Te in Cu18Ga25SbxTe50-x, the active Sb-5p orbital hybridizes with those of Cu-4s and Te-5p in the valence band, which makes the Fermi level (Ef) unpin and move toward the inner side of the valence band as Sb content increases.
Effect of Solid Carburization on the Tribological Behaviors of Ti13Nb13Zr Alloy
Due to its high mechanical strength, exceptional biocompatibility, low elastic modulus, and superior corrosion resistance, Ti13Nb13Zr alloy is one of the potential candidates for implanted joints. However, the poor tribological property of Ti13Nb13Zr alloy has greatly limited its wide usage in artificial joints. The elevated temperature solid carburizing technology was used to improve tribological property of Ti13Nb13Zr alloy.
Show More
loading
Actions
Is this you?
As a journalist, you can create a free Muck Rack account to customize your profile, list your contact preferences, and upload a portfolio of your best work.Get in touch with Junhao
Contact Junhao, search articles and posts on X, monitor coverage, and track replies from one place.
Learn more about Muck Rack