Maoz Gelbart

See the online docs for an annotated version of these notes with working links. This is a major release with a number of important new features and changes. The highlight is a major overhaul to seaborn's categorical plotting functions, providing them with many new capabilities and better aligning their API with the rest of the library.

This is a release candidate for seaborn v0.13.0, a major release with a complete overhaul of seaborn's categorical plotting functions. Please test the release candidate, especially the categorical plots. The internals of these functions have been completely rewritten to provide new functionality and to better align with the rest of the library. There are some intentional changes to default behavior / deprecations, but also the potential for unintentional breakage.

HIV has a high mutation rate, which contributes to its ability to evolve quickly. However, we know little about the fitness costs of individual HIV mutations in vivo, their distribution and the different factors shaping the viral fitness landscape. We calculated the mean frequency of transition mutations at 870 sites of the pol gene in 160 patients, allowing us to determine the cost of these mutations.