Skip To Main Content
Noor Pratap Singh on Muck Rack

Noor Pratap Singh

As seen in: BioRxiv, Genome Research
Is this you? As a journalist, you can create a free Muck Rack account to customize your profile, list your contact preferences, and upload a portfolio of your best work. Claim your profile

Get in touch with Noor Pratap

Contact Noor Pratap, search articles and posts on X, monitor coverage, and track replies from one place.

Learn more about Muck Rack

Actions

Share this page

Is this you?

As a journalist, you can create a free Muck Rack account to customize your profile, list your contact preferences, and upload a portfolio of your best work.
Claim your profile

Articles

Tree-based differential testing using inferential uncertainty for RNA-seq

|
By Noor Pratap Singh, Euphy Wu, Jason Fan, Michael Love
| Genome Research
1 1Department of Computer Science, University of Maryland, College Park, Maryland 20742, USA; 2Department of Biostatistics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA; 3Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27514, USA Corresponding author: rob{at}cs.umd.edu Footnotes [Supplemental material is available for this article.] Article published online before print.
Open in Who Shared View Duplicates (5) Issue with article?

Alevin-fry-atac enables rapid and memory frugal mapping of single-cell ATAC-seq data using virtual colors for accurate genomic pseudoalignment

|
By Noor Pratap Singh, Jamshed Khan, Rob Patro
| BioRxiv
Abstract Ultrafast mapping of short reads via lightweight mapping techniques such as pseudoalignment has significantly accelerated transcriptomic and metagenomic analyses, often with minimal accuracy loss compared to alignment-based methods. However, applying pseudoalignment to large genomic references, like chromosomes, is challenging due to their size and repetitive sequences. We introduce a new and modified pseudoalignment scheme that partitions each reference into "virtual colors".
Open in Who Shared Issue with article?

An RNAi screen of Rab GTPase genes in C. elegans reveals that somatic cells of the reproductive system depend on rab-1 for morphogenesis but not stem cell niche maintenance

|
By Noor Pratap Singh, Kacy Lynn Gordon, Kayt Fay Scott
| BioRxiv
Abstract Membrane trafficking is a crucial function of all cells and is regulated at multiple levels from vesicle formation, packaging, and localization to fusion, exocytosis, and endocytosis. Rab GTPase proteins are core regulators of eukaryotic membrane trafficking, but developmental roles of specific Rab GTPases are less well characterized, potentially because of their essentiality for basic cellular function. C.
Open in Who Shared Issue with article?
See all 13 articles