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Articles by R. Brian
Divergent ecological adaptation in allopatry leads to behavioral isolation through female resistance
Coyne JA, Orr HA. Speciation. Sinauer Associates, Inc. Publishers; 2004. Google Scholar Anderson SAS, Weir JT. The role of divergent ecological adaptation during allopatric speciation in vertebrates. Science. 2022;378:1214–18. Article CAS PubMed Google Scholar Langerhans RB, Riesch R. Speciation by selection: a framework for understanding ecology’s role in speciation. Curr Zool. 2013;59:31–52. Article Google Scholar Schluter D. Evidence for ecological speciation and its alternative. Science. 2009;323:737–41.
MEDOC: A Fast, Scalable, and Mathematically Exact Algorithm for the Site-Specific Prediction of the Protonation Degree in Large Disordered Proteins
Introduction Click to copy section linkSection link copied! Electrostatic interactions are major driving factors for many molecular interactions. (1−3) In particular, ensembles of intrinsically disordered proteins are largely determined by the number and patterning of the charged residues in their sequences.
F1000Research Article: Publisher preferences for a journal transparency tool: A modified three-round Delphi study.
Introduction Peer-reviewed scholarly journals play a critical role in disseminating biomedical research. Scientific publications must be reported and disseminated according to best-practice standards to be of use to clinicians, researchers, patients, and others. For example, published research should be properly indexed and archived so that it can be found and preserved over time.
Attitudes and perceptions of biomedical journal editors in chief towards the use of artificial intelligence chatbots in the scholarly publishing process: a cross-sectional survey | Research Integrity and Peer Review
Abstract Artificial intelligence chatbots (AICs) are designed to mimic human conversations through text or speech, offering both opportunities and challenges in scholarly publishing. While journal policies of AICs are becoming more defined, there is still a limited understanding of how Editors in chief (EiCs) of biomedical journals’ view these tools.
FREEDA: An automated computational pipeline guides experimental testing of protein innovation
Figure 1. Overview of the FREEDA pipeline. The schematic shows the main steps, with more details in Materials and methods. Launching the FREEDA application opens a graphical user interface (gray), which prompts selection of a reference species and a gene name. First, operating on the selected reference species (blue path), FREEDA downloads the genome and uses it to curate input for the gene of interest (protein sequence, exon sequences, coding sequence, and gene sequence).
Role of Ultrafast Internal Conversion and Intersystem Crossing in the Nonadiabatic Relaxation Dynamics of ortho-Nitrobenzaldehyde
Abstract ortho-Nitrobenzaldehyde (oNBA) is a well-known photoactivated acid and a prototypical photolabile nitro-aromatic compound. Despite extensive investigations, the ultrafast relaxation dynamics of oNBA is still not properly understood, especially concerning the role of the triplet states.
Urbanization Alters Swimming Performance of a Stream Fish
Introduction Human impacts on the environment present one of the greatest challenges for conservation worldwide (Young et al., 2005; Worm et al., 2009; Barbier, 2011). Urbanization in particular is a pervasive, rapidly expanding type of impact that causes dramatic changes in natural ecosystems (Marzluff, 2001; McKinney, 2008).
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