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Sandeep S. Amberkar

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GET_PANGENES: calling pangenes from plant genome alignments confirms presence-absence variation - Genome Biology

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By Bruno Contreras-Moreira, Paul Flicek, Andrew Jones, Sarah Dyer, Shradha Saraf, Guy Naamati, Sandeep S. Amberkar
| Genome Biology Verified
A total of four datasets were used in this study (Arabidopsis ACK2, rice3, chr1wheat10 and barley20) of increasing size and complexity. They are listed in Table 1, where ACK stands for the Ancestral Crucifer Karyotype [23] and chr1wheat10 for chromosome 1 in ten different hexaploid wheats. Note that ACK2 and rice3 include different species (Arabidopsis lyrata and Oryza nivara); the others include cultivars of the same species.
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