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Zhumur Ghosh on Muck Rack

Zhumur Ghosh

As seen in: Wiley Online Library, BioRxiv
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Articles

LncPTPred: Predicting lncRNA-Protein Interaction based on Crosslinking and Immunoprecipitation (CLIP-Seq) Data

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By Gourab Das, Troyee Das, Zhumur Ghosh
| BioRxiv
Abstract Long non-coding RNA (lncRNA)-Protein Interaction (LPI) across diverse biological systems directly and indirectly regulates various cellular processes. Experimental assays to recognize the protein binding partners of lncRNAs is highly time consuming and expensive. In-silico predictive approaches involving pattern recognition technique provides a promising alternative to it by reducing the search space.
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LncPTPred: Predicting lncRNA-Protein Interaction based on Crosslinking and Immunoprecipitation (CLIP-Seq) Data

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By Gourab Das, Troyee Das, Zhumur Ghosh
| BioRxiv
Abstract Long non-coding RNA (lncRNA)-Protein Interaction (LPI) across diverse biological systems directly and indirectly regulates various cellular processes. Experimental assays to recognize the protein binding partners of lncRNAs is highly time consuming and expensive. In-silico predictive approaches involving pattern recognition technique provides a promising alternative to it by reducing the search space.
Open in Who Shared Issue with article?

SecDATA: Secure Data Access and de novo Transcript Assembly protocol - To meet the challenge of reliable NGS data analysis

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By Sudip Mondal, Namrata Bhattacharya, Troyee Das, Zhumur Ghosh
| BioRxiv
Abstract Recent developments in sequencing technologies have created new opportunities to generate high-throughput biological data at an affordable price. Such high-throughput data needs immense computational resources for performing transcript assembly. Further, a high-end storage facility is needed to store the analyzed data and raw data. Here comes the need for centralized repositories to store such mountains of raw and analyzed data.
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