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Arda Söylev on Muck Rack

Arda Söylev

Konya
As seen in: PLOS, BioRxiv
Assistant professor working on computational genomics and algorithms
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Articles

SVarp: pangenome-based structural variant discovery

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By Arda Söylev, Jana Ebler, Tobias Rausch, Samarendra Pani
| BioRxiv
Abstract The linear human reference genome that we use today does not represent the haplotypic diversity of the global human population. This raises bias in genomic read alignment and limits our ability to call large structural variations (SV), especially at highly polymorphic loci. Thus, many SV alleles remain unresolved.
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CONGA: Copy number variation genotyping in ancient genomes and low-coverage sequencing data

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By Heinrich Heine, Dilek Koptekin, Arda Söylev, Sevim Seda Çokoglu
| PLOS
Creating and analyzing the refined deletion data set and the SNP data set SNP genotyping in ancient genomes. Following the same reasoning as above regarding ascertainment bias, we used the African population as an ascertainment population to create an SNP genotyping set for calling SNPs in the ancient genomes.
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