John Mccrone on Muck Rack

John Mccrone

Verified
Christchurch
As seen in: Emerging Infectious Diseases, Nature, New Scientist, Stuff.co.nz, Science Magazine, Cell Press, The Lancet, medRxiv, The Press (New Zealand)
Science writer and former Press/Stuff journalist
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Articles

BEAST X for Bayesian phylogenetic, phylogeographic and phylodynamic inference - Nature Methods

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By Guy Baele, Xiang Ji, Gabriel W. Hassler, John Mccrone Verified, Zhenyu Zhang, Philippe Lemey, Alexei J Drummond, Andrew Rambaut
| Nature Verified
Abstract Here we present the open-source and cross-platform BEAST X software that combines molecular phylogenetic reconstruction with complex trait evolution, divergence-time dating and coalescent demographics in an efficient statistical inference engine. BEAST X significantly advances the flexibility and scalability of evolutionary models supported.
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Genomic epidemiology of early SARS-CoV-2 transmission dynamics in Bangladesh

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By John Mccrone Verified, Louis du Plessis, Mahmudul Hasan, Lorcan Carnegie
| medRxiv
The authors have declared no competing interest. L.C. is supported by a Biotechnology and Biological Sciences Research Council (BBSRC) London Interdisciplinary Biosciences Consortium (LIDo) studentship [grant number BB/T008709/1]. S.C.H. is supported by a Sir Henry Wellcome Postdoctoral Fellowship from the Wellcome Trust [220414/Z/20/Z] (https://wellcome.org/).
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Context-specific emergence and growth of the SARS-CoV-2 Delta variant - Nature

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By John Mccrone Verified, Ben Lambert, Rhys Inward, Erik M Volz, Christopher Ruis, Guy Baele, Adam Sadilek, Xiang Ji, Ben Jackson, Rachel M. Colquhoun, Thomas Peacock, Simon Thelwall, Nuno R Faria, Louis du Plessis, Wendy Barclay, Thomas B. Connor, Marc A. Suchard, Oliver G. Pybus, Andrew Rambaut
| Nature Verified
Genomic data International (non-UK) sequences were downloaded from GISAID on 15 September 2021 and combined with sequences from England taken as part of community surveillance (pillar 2) available from COG-UK as of September 2021. Each week, each of the pillar 2 testing laboratories selected a number of 96-well plates proportional to the fraction of all testing done at the laboratory, for sequencing.
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