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Patrick Ronan Elsenbroich on Muck Rack

Patrick Ronan Elsenbroich

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Articles

Integrating binding affinity and tonic signaling enables a rational CAR design for augmented T cell function

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By Markus Barden, Moritz Ertelt, Patrick Ronan Elsenbroich, Vivian Haas
| The BMJ Verified
Methods The structure of all scFvs was predicted with AlphaFold2.18 The solution builder of CHARMM‐GUI19 was used for system solvation with TIP3P water molecules, and charge was neutralized with NaCl. All simulations used the Amber ff19sb force field.20 The calculations were performed with the Amber molecular dynamics (MDs) package through the pmemd software.21 After an initial minimization step, Langevin dynamics with a friction coefficient of 1 ps−1 were applied for linear heating of the...
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