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Andrew Bartko

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Articles

Multi-omics analyses of facial skin in acne identify distinct microbial and metabolic features at lesional and non-lesional sites

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By Yang Chen, Britta De Pessemier, Tyler Myers, Simone Zuffa, Jasmine Zemlin, Magali Moreau, Jolanta Idkowiak-Baldys, Chloe Lieng, Samia Almoughrabie, Anna Nguyen, Josh L. Espinoza, Christopher L. Dupont, Chris Callewaert, Daniel McDonald, Daniel Mcdonald, Karsten Zengler, Andrew Bartko, Philippe Barbarat, Richard L. Gallo, Pieter C. Dorrestein, Qian Zheng, Amina Bouslimani, Rob Knight Verified, Sayeh Pourhamidi, Iveta Kalcheva, Tom Van de Wiele, Luc Aguilar
| Nature Verified
Abstract The microbial and biochemical landscape of clinically normal-appearing skin in individuals with acne remains uncharacterized. Here, we performed longitudinal multi-omics profiling of facial skin from 10 moderate acne patients and 10 healthy controls, integrating 16S rRNA gene sequencing, shotgun metagenomics, and untargeted metabolomics across lesional and non-lesional sites.
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Temporal nutrition analysis associates dietary regularity and quality with gut microbiome diversity: insights from the Food & You digital cohort - Nature Communications

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By Andrew Bartko
| Nature Verified
Abstract The gut microbiota is profoundly influenced by dietary choices, with emerging evidence linking it to various health outcomes. Here, we investigate diet-microbiota associations using detailed temporal nutrition intake data captured through real-time food logging via a smartphone app and gut microbiota profiles from 16S rDNA sequencing in ~ 1,000 participants from a digital cohort on personalized nutrition (“Food & You” - clinicaltrials.gov NCT03848299).
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Author Correction: Greengenes2 unifies microbial data in a single reference tree - Nature Biotechnology

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By Qiyun Zhu, Donovan H. Parks, Mads Albertsen, Philip Hugenholtz, Andrew Bartko, Aki S Havulinna, Veikko Salomaa, Siavash Mirarab
| Nature Verified
Correction to: Nature Biotechnology https://doi.org/10.1038/s41587-023-01845-1, published online 27 July 2023. In the version of the article initially published, a portion of the Competing interests statement was missing: “R.K. is a scientific advisory board member, and consultant for BiomeSense, Inc., has equity and receives income.
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