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Genomic correlates of clinical CAR T cell activity
Editor’s summary Abstract INTRODUCTION RESULTS DISCUSSION MATERIALS AND METHODS Acknowledgments Supplementary Materials REFERENCES AND NOTES Information & Authors Metrics & Citations View Options References Figures Tables Media Share Editor’s summary Chimeric antigen receptor T cell (CAR T cell) therapies are generated from human T cells and carry germline variants that may affect their function. Leick et al.
Patient-partnered multiomics reveals the molecular architecture of angiosarcoma
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Abstract Angiosarcoma is a poorly understood sarcoma due to its high heterogeneity and rarity. Here we show a comprehensive clinical and molecular analysis of a large cohort of 254 angiosarcoma patients through the patient-partnered Angiosarcoma Project. By integrating transcriptomic, somatic, and germline variant data, we find that subcutaneous angiosarcomas frequently exhibit TGF-β and receptor tyrosine kinase signaling upregulation, with driver mutations in KDR, PLCG1, and POT1.
By Hoyin Chu, Brittany A Borden, Christopher Reilly, Beena S. Thomas, Erica Pimenta, Seunghun Han, Sabrina Y. Camp, Riaz Gillani, Jacob Gutierrez, Caleb A Lareau, Matthew Nagy, Jeremy Johnson, Lauren Sterlin, Delia Sosa, Ilan Small, Mary McGillicuddy, Nouf Abdullah Alharbi, Jason L. Hornick, Hani Choudhry, Diane Diehl, Eliezer Van Allen, Nikhil Wagle, Corrie A. Painter, Saud H. AlDubayan, Marissa Hollyer, Kolbe Phelps, Oyin Alao, Hadley Grundman, Will Terzi, Elana Anastasio, Parker Chastain, Priyanka Bhakhri
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Nature
Verified
Population-scale sequencing resolves determinants of persistent EBV DNA - Nature
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Abstract Epstein–Barr virus (EBV) is an endemic herpesvirus implicated in autoimmunity, cancer and neurological disorders. Although primary infection is often subclinical, persistent EBV infection can drive immune dysregulation and long-term complications. Despite the ubiquity of infection, the determinants of EBV persistence following primary exposure remain poorly understood, although human genetic variation partially contributes to this phenotypic spectrum1,2,3.
By Sherry S. Nyeo, Erin M Cumming, Oliver S. Burren, Meghana S. Pagadala, Jacob Gutierrez, Laura C. Kida, Yifan Chen, Fengyuan Hu, Xueqing Zou, Benjamin Hollis Verified, Margarete A. Fabre, Stewart MacArthur, Quanli Wang, Leif S. Ludwig, Kushal Dey, Slavé Petrovski, Ryan S. Dhindsa, Caleb A Lareau, Thahmina A. Ali, Hoyin Chu
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Nature
Verified
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As a journalist, you can create a free Muck Rack account to customize your profile, list your contact preferences, and upload a portfolio of your best work.Get in touch with Hoyin
Contact Hoyin, search articles and posts on X, monitor coverage, and track replies from one place.
Learn more about Muck Rack